Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015789886.1_cds_XP_016498995.1_1225
CDS Infomation

[gene=LOC107817639] [db_xref=GeneID:107817639] [protein=probable beta-1,4-xylosyltransferase IRX10L] [protein_id=XP_016498995.1] [location=join(100190..100295,102260..102648,102865..103106,103626..104139)] [gbkey=CDS]
Sequence

ATGAGGAATTTGAGATTAGGTTTTATTTGGCTTCTTTATTTTACTTTCCTTTTGGGAATT
GAAGCCCTCAAATTTCATAGAACCGAGCATACTGAGAGAATCTCAGGTAGTGCTGGTGAT
GTCTTGGAAGATGATCCAGTTGGGAGGTTAAAAGTTTTTGTATATGAGCTTCCAAGCAAA
TACAACAAGAAAATTCTTCAGAAAGACCCACGATGTCTCAGCCACATGTTTGCTGCGGAG
ATCTATATGCATCGTTTCCTCTTATCTAGCCCTGTCCGAACCCTTAATCCTGAGGAAGCT
GATTGGTTCTACACCCCTGTTTATACCACTTGTGACCTGACACCAAATGGCCTTCCTTTA
CCCTTCAAGTCGCCACGAATGATGAGGAGCGCAATACAACTTATTGCTTCTAACTGGCCT
TATTGGAATAGGACTGAGGGTGCTGATCACTTCTTCATTGTCCCACACGATTTTGCCGCT
TGTTTTCATTATCAAGAGGAAAAAGCTATCGGGAGGGGAATTCTTCCATTGCTCCAGCGT
GCAACTCTGGTTCAAACTTTTGGACAAAGAAATCATGTGTGTTTAAAGGATGGTTCAATT
ACAATTCCTCCCTATGCTCCTCCGCAGAAAATGCAGTCCCACTTCATCCCTCCAGATATT
CCACGATCCATCTTTGTTTACTTTCGTGGATTGTTCTATGATGTAGGAAATGATCCAGAA
GGTGGTTACTATGCAAGAGGTGCACGGGCAGCAGTATGGGAGAACTTTAAAGACAATCCT
CTCTTTGACATTTCTACGGAACATCCAACTACCTACTACGAAGACATGCAGCGAGCCATC
TTTTGCTTGTGTCCACTTGGGTGGGCTCCGTGGAGTCCAAGATTGGTTGAAGCAGTTATA
TTCGGTTGCATCCCTGTTATTATTGCAGATGACATTGTCTTGCCATTTGCTGATGCAATC
CCCTGGGAAGAGATTGGTGTTTTTGTAGACGAGAAGGACGTCCCAAATTTGGATACTATT
CTCACTTCTATTCCACCAGAGGAAATATTGAGGAAGCAGAGATTGCTTGCTAACCCTTCA
ATGAAGCAGGCTATGTTATTTCCACAACCTGCTCAACCAGGTGATGCTTTCCATCAAATA
TTGAATGGACTTGCTCGTAAACTGCCACACGATAGGAGCGTTTACTTGAGTCCTGGGGAG
AAGATCTTAAACTGGACTGCTGGTCCAGTTGGCGACCTAAAACCTTGGTAA

Peptide Sequence

PEP ID

XP_016498995.1
PEP Infomation

PREDICTED: probable beta-1,4-xylosyltransferase IRX10L [Nicotiana tabacum]
Sequence

MRNLRLGFIWLLYFTFLLGIEALKFHRTEHTERISGSAGDVLEDDPVGRLKVFVYELPSK
YNKKILQKDPRCLSHMFAAEIYMHRFLLSSPVRTLNPEEADWFYTPVYTTCDLTPNGLPL
PFKSPRMMRSAIQLIASNWPYWNRTEGADHFFIVPHDFAACFHYQEEKAIGRGILPLLQR
ATLVQTFGQRNHVCLKDGSITIPPYAPPQKMQSHFIPPDIPRSIFVYFRGLFYDVGNDPE
GGYYARGARAAVWENFKDNPLFDISTEHPTTYYEDMQRAIFCLCPLGWAPWSPRLVEAVI
FGCIPVIIADDIVLPFADAIPWEEIGVFVDEKDVPNLDTILTSIPPEEILRKQRLLANPS
MKQAMLFPQPAQPGDAFHQILNGLARKLPHDRSVYLSPGEKILNWTAGPVGDLKPW

Transcript Sequence

Gene sequence data has not been registered.